References
Experimental Design References
Debey, S., T. Zander, et al. (2006). "A highly standardized, robust, and cost-effective method for genome-wide transcriptome analysis of peripheral blood applicable to large-scale clinical trials." Genomics 87(5): 653-64.
Studer SM, Richards T, Wu W, McCurry KR, Kaminski N (2007) 331: Gene expression profiles in peripheral blood for the noninvasive diagnosis of chronic lung allograft rejection. Journal of Heart and Lung Transplantation 26(2): S175.
Debey, S., T. Zander, et al. (2006). "A highly standardized, robust, and cost-effective method for genome-wide transcriptome analysis of peripheral blood applicable to large-scale clinical trials." Genomics 87(5): 653-64.
Studer SM, Richards T, Wu W, McCurry KR, Kaminski N (2007) 331: Gene expression profiles in peripheral blood for the noninvasive diagnosis of chronic lung allograft rejection. Journal of Heart and Lung Transplantation 26(2): S175.
Sample Labeling References
Schwab et al. (2007) "Pygo1 and Pygo2 roles in Wnt signaling in
mammalian kidney development." BMC Biology 2007, 5:15.
Data Analysis References
Cheadle, C., K. G. Becker, et al. (2007). "A rapid method for microarry cross platform comparisons using gene expression signatures." Mol Cell Probes 21(1): 35-46.
Nature Biotechnology - Microarray Quality Control
From Nature.com:
This focus presents the first formal results of the MicroArray Quality Control (MAQC) project, an unprecedented, community-wide effort, under the auspices of the FDA, with the goal of experimentally addressing the key issues surrounding the reliability of DNA microarray data and establishing operational metrics to objectively assess the performance of seven microarray platforms. Ultimately, it is hoped that the MAQC effort will provide the research and regulatory communities with a foundation from which to derive the necessary guidelines for using microarrays in clinical practice and regulatory decision-making.
View the MAQC Nature Biotechnology papers.